If you use the paid version I can't help you, somebody who uses it will be able to help you, I'm a free user myself.

If you use the trial have you set a rogue deck in the Auto Daily Quest tab?
If not open the task editor window, go to the auto daily quest tab, tick your quest, choose a rogue deck and any deck settings.
Then in the basic settings tab choose the, use queu, setting and in the dropdown menu saying deck choose, as daily quest deck.